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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6d1pB_

Fold library idPDB HeaderMoleculeTitle
c6d1pB_2.35PDB header: hydrolaseChain: B: PDB Molecule: glycosyl hydrolases family 2, sugar binding domain protein;


Added to library: Sat Oct 20 08:58:36 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LIPTDRKQRLTEHWEFIRQDMGSIWEVMRPITGAGKPETVPLWQKVTLPHCFNAEDAVDPDVNYYQGPGW
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Known secondary structure (DSSP)



S



SSSS

S




STT
GGG
S


SS

TTTTTTT
TTS



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence YRTMLNIENPYTNGRTCLEFEGAGQKTEVYVYTTRIASHVGGYDEWKADITEAVEAFRRTPLCRERFGGK
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Known secondary structure (DSSP)




STT
S

BSTT
SSS

TSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence IPIAIRCDNSRDTEMIPSDMSDFNLYGGLYRYVNLVYTPAVHFEQIRIEATTDEKGKQGSISIDIAFGGL
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Known secondary structure (DSSP)



TTSSS
TTSSS



B

S

SS


TTS


 .........220.........230.........240.........250.........260.........270.........280
Sequence KEFSLRVFSPEGKEVNSISSELSSYQISLKRPQLWSPHSPALYTCVAELIDNGDTLRTTQHFGFRHFRFE
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Known secondary structure (DSSP)


TTS




S

B

SSS


TT
B


 .........290.........300.........310.........320.........330.........340.........350
Sequence EKGPFYLNGERLLLRGTHRHEDHAGVGAALTEEMMRTEMQQIKEMGANFIRLGHYQQSGIILRLCDELGL
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Known secondary structure (DSSP) TTS
TT



S
BTTTBT


T


TTS


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence LVWEEIPWCRGGLGGESYKNQARRMLTNMIEQHRNHPSVILWGLGNENDWPGDFQTFEKDSIRAFMGELH
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Known secondary structure (DSSP)
S




TT
TT
SSS


 .........430.........440.........450.........460.........470.........480.........490
Sequence DLAHRLDPTRSTAIRRCEFCKDIVDVYSPTIWAGWYGRRFRNYREMETAGINATTRFLHAEWGGDSHAGR
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Known secondary structure (DSSP)
TTSS
GGGTTTSS



BTTTBS
GGGTSSSB







TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence HMEVNKEKGIDNFDIEAADRNGDWSESYIIRLFDWHLKEQETMPRLTGSLFWTFKDFSTPLRPDNPIPYV
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Known secondary structure (DSSP)








SSTT

S
S


TT
TT


S
SB

TT
TTSSSTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence NQKGVVQRDGTPKESYYVFQSYWSSKPMLHIYGHSWPVRWGKPGEPKEILVYSNCPEVELFVNGVSQGRK
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Known secondary structure (DSSP)


SB
TTS
B
T

S

TTTT


STT

SSTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence KRNSQDFPAAGLRWNVPLREGNNKITATGYDGKLRLDDEIQQEYQTRTWGKPSRILLTQTAQDAETILVQ
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Known secondary structure (DSSP)

TTSTTTTT


STT
S


S





SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence AELIDENGIRCLDACQFIEFGCTDSEALLRNQGTAQGSRRIQAANGRASIRVNKQHAPVVVSASDSKRIL
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Known secondary structure (DSSP)
TTS
B
TT


SSTTTB

SSSSSSS
S
SSSGGG
STT

S
 .........
Sequence KTALISVSG
Predicted secondary structure


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Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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