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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6cv9C_

Fold library idPDB HeaderMoleculeTitle
c6cv9C_3.80PDB header: transport proteinChain: C: PDB Molecule: short transient receptor potential channel 6;


Added to library: Sat May 26 09:37:01 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MLSIEEERFLDAAEYGNIPVVRKMLEECHSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGD
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Known secondary structure (DSSP)


T
SS
S


SS


SSS
TTTTTT


SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence ALLLAISKGYVRIVEAILNHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYE
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Known secondary structure (DSSP) TT
SSSTT
SSS

SSS

S


TTS
SS
S

SS
SS

TTST
 .........150.........160.........170.........180.........190.........200.........210
Sequence IVHTLLRKGARIERPHDYFCKCTECSQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNE
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Known secondary structure (DSSP)







S


SSS

SSTTSSS
TSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LAVLANIEKEFKNDYRKLSMQCKDFVVGLLDLCRNPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKE
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Known secondary structure (DSSP) SS
S

S

TSS


 .........290.........300.........310......
Sequence IKQDISSLRYELLEEKSQNTEDLAELIRKLGERLSL
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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