Fold library entry viewer: c6csxA_

Added to library: Sat Dec 8 09:06:56 2018
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	P	N	F	F	I	D	R	P	I	F	A	W	V	I	A	I	I	I	M	L	A	G	G	L	A	I	L	K	L	P	V	A	Q	Y	P	T	I	A	P	P	A	V	T	I	S	A	S	Y	P	G	A	D	A	K	T	V	Q	D	T	V	T	Q	V	I	E	Q	N	M	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S																				T	T	S		B		S	S		S		S											T	T			T	T						T	T	T	T	S	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	I	D	N	L	M	Y	M	S	S	N	S	D	S	T	G	T	V	Q	I	T	L	T	F	E	S	G	T	D	A	D	I	A	Q	V	Q	V	Q	N	K	L	Q	L	A	M	P	L	L	P	Q	E	V	Q	Q	Q	G	V	S	V	E	K	S	S	S	S	F	L	M	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T										T	T	S										T	T															T	T	T	G	G	G	S						T	T									S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	V	I	N	T	D	G	T	M	T	Q	E	D	I	S	D	Y	V	A	A	N	M	K	D	A	I	S	R	T	S	G	V	G	D	V	Q	L	F	G	S	Q	Y	A	M	R	I	W	M	N	P	N	E	L	N	K	F	Q	L	T	P	V	D	V	I	T	A	I	K	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S	S												S	S						T	S	T	T							S	S																	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	A	Q	V	A	A	G	Q	L	G	G	T	P	P	V	K	G	Q	Q	L	N	A	S	I	I	A	Q	T	R	L	T	S	T	E	E	F	G	K	I	L	L	K	V	N	Q	D	G	S	R	V	L	L	R	D	V	A	K	I	E	L	G	G	E	N	Y	D	I	I	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									T		S	S			T	T															S					T	T							T	T	S					G	G	G	T								S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	N	G	Q	P	A	S	G	L	G	I	K	L	A	T	G	A	N	A	L	D	T	A	A	A	I	R	A	E	L	A	K	M	E	P	F	F	P	S	G	L	K	I	V	Y	P	Y	D	T	T	P	F	V	K	I	S	I	H	E	V	V	K	T	L	V	E	A	I	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T												T	T																		G	G	G	S		T	T									S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	A	D	A	I	V	V	V	E	N	V	E	R	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T							T																				T	T			B										T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	E	E	G	L	P	P	K	E	A	T	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	P	M	A	F	F	G	G	S	T	G	A	I	Y	R	Q	F	S	I	T	I	V	S	A	M	A	L	S	V	L	V	A	L	I	L	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																											-			S	T	G	G	G	S			S																									T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	L	C	A	T	M	L	K	P	R	Y	L	V	L	Y	L	I	I	V	V	G	M	A	Y	L	F	V	R	L	P	S	S	F	L	P	D	E	D	Q	G	V	F	M	T	M	V	Q	L	P	A	G	A	T	Q	E	R	T	Q	K	V	L	N	E	V	T	H	Y	Y	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S																				T	T	T	S		B		S							S										T	T																		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	E	K	N	N	V	E	S	V	F	A	V	N	G	F	G	F	A	G	R	G	Q	N	T	G	I	A	F	V	S	L	K	D	W	A	D	R	P	G	E	E	N	K	V	E	A	I	T	M	R	A	T	R	A	F	S	Q	I	K	D	A	M	V	F	A	F	N	L	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	T									S			S	S			S	T	T											G	G	G	S		S	S	T	T	S													T	T	S	T	T										S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	V	E	L	G	T	A	T	G	F	D	F	E	L	I	D	Q	A	G	L	G	H	E	K	L	T	Q	A	R	N	Q	L	L	A	E	A	A	K	H	P	D	M	L	T	S	V	R	P	N	G	L	E	D	T	P	Q	F	K	I	D	I	D	Q	E	K	A	Q	A	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	T		S	S	S	S									S	S																			T		T	T	T							S	S																		T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	S	I	N	D	I	N	T	T	L	G	A	A	W	G	G	S	Y	V	N	D	F	I	D	R	G	R	V	K	K	V	Y	V	M	S	E	A	K	Y	R	M	L	P	D	D	I	G	D	W	Y	V	R	A	A	D	G	Q	M	V	P	F	S	A	F	S	S	S	R	W	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T										T	T											G	G	G	S	S	S	G	G	G	G	G	G						T	T	S					G	G	G	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	Y	G	S	P	R	L	E	R	Y	N	G	L	P	S	M	E	I	L	G	Q	A	A	P	G	K	S	T	G	E	A	M	E	L	M	E	Q	L	A	S	K	L	P	T	G	V	G	Y	D	W	T	G	M	S	Y	Q	E	R	L	S	G	N	Q	A	P	S	L	Y	A	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S						T	T												T	T	S							T	T					T	T	S	S		T	T							T						T	T	S	S	T	T	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	L	I	V	V	F	L	C	L	A	A	L	Y	E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	E	F	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T		S	S	T	T					T	T															T	T			B																							S	T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.
Sequence	L	R	P	I	L	M	T	S	L	A	F	I	L	G	V	M	P	L	V	I	S	T	G	A	G	S	G	A	Q	N	A	V	G	T	G	V	M	G	G	M	V	T	A	T	V	L	A	I	F	F	V	P	V	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S					S			S	T	T																	T	T	T	S					T

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PDB structure

FASTA sequence

Hidden Markov model

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