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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6csfC_

Fold library idPDB HeaderMoleculeTitle
c6csfC_3.30PDB header: membrane proteinChain: C: PDB Molecule: sodium/alanine symporter agcs;


Added to library: Sat Feb 2 08:42:50 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPYMLVLLLGTGIFLTLRLGFMQIHTLPYALKLAFSKHETSEGDISHFQALMTALAATIGTGNIAGVATA
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Known secondary structure (DSSP)
TTTST




SS
SB
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YVLGGPGAIFWMWVTAFFGMATKYAEAVLAIKYRTVDDNGEMAGGPMYFLEKGLPLGKILGVAFAFFGAF
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Known secondary structure (DSSP)
TTTTS
B

SSSS

B
STS


 .........150.........160.........170.........180.........190.........200.........210
Sequence AAFGIGNMVQTNSVADAVASNFGVDPLITGFVLAIFTAAVILGGIKSIGKATGIIVPFMAVFYILAGLVI
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Known secondary structure (DSSP) TTTT


SST
 .........220.........230.........240.........250.........260.........270.........280
Sequence LAMNIGYIIPAFGTIFSSAFNFSAGFGALIGTAIMWGVKRGVFSNEAGLGSAPIAAAAAKTDHPGRQALV
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Known secondary structure (DSSP) TSTTSSS

SSSSST

TTS
STTB

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SMTGTFLDTIVVCTITGLVLTIAGLKAFPGLTDLTGASLTAASFDALMPMGGLIVTIGLVFFAYSTVLGW
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Known secondary structure (DSSP) TTTS

SSGGG

SSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence SYYGEKCFEYLIGTKGIRLYRIAFVLVAFWGATASLPLVWNIADTLNGAMAIPNLIGLLLLSGVVVSETK
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Known secondary structure (DSSP) GGGSS

TTT
 ........
Sequence AFNEIRKN
Predicted secondary structure


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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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