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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6crjC_

Fold library idPDB HeaderMoleculeTitle
c6crjC_8.00PDB header: virusChain: C: PDB Molecule: norwalk virus, mnv-1 capsid protein chimera;


Added to library: Sat Apr 7 08:16:27 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DPLAMDPVAGSSTAVATAGQVNPIDPWIINNFVQAPQGEFTISPNNTPGDVLFDLSLGPHLNPFLLHLSQ
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Known secondary structure (DSSP)


S





TTTSS

B


T


TT

TT

SGGGST
 .........80.........90.........100.........110.........120.........130.........140
Sequence MYNGWVGNMRVRIMLAGNAFTAGKIIVSCIPPGFGSHNLTIAQATLFPHVIADVRTLDPIEVPLEDVRNV
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Known secondary structure (DSSP) TBS



TT



SSS





TSSTT

S




SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LFHNNDRNQQTMRLVCMLYTPLRTGGGTGDSFVVAGRVMTCPSPDFNFLFLVPAAAAAARMVDLPVIQPR
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Known secondary structure (DSSP) SSS
SS




S




SS

TT


TT


B
















GG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LCTHARWPAPVYGLLVDPSLPSNPQWQNGRVHVDGTLLGTTPISGSWVSCFAAEAAYEFQSGTGEVATFT
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Known secondary structure (DSSP) GSB
SSSSSB


TTS
SS


SSS
B
TTS
B
TT

SSGGGTT



SSSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence LIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASV
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Known secondary structure (DSSP)
TTS
B



SSSSSTT


S


STT




S

SS


BGGGT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TAALVDGRVRAVPRSIYGFQDTIPEYNDGLLVPLAPPIGPFLPGEVLLRFRTYMRQIDTADAAAEAIDCA
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Known secondary structure (DSSP) TT




S


SSTTS






S



TT


SS

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence LPQEFVSWFASNAFTVQSEALLLRYRNTLTGQLLFECKLYNEGYIALSYSGSGPLTFPTDGIFEVVSWVP
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Known secondary structure (DSSP) S





SS
TTT

TTTB

SS


SS





 .........500........
Sequence RLYQLASVGSLATGRMLK
Predicted secondary structure








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Known secondary structure (DSSP) TT




BS









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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