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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6cp0A_

Fold library idPDB HeaderMoleculeTitle
c6cp0A_3.01PDB header: ligaseChain: A: PDB Molecule: sdca;


Added to library: Sat Aug 4 08:29:58 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DKIKFKEPERCEYLHIAKDNKVHILLPIVGGDEIGLDNTAETTGELLTFFYGKTHGGTKYSAEHHLNEYK
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Known secondary structure (DSSP)







S

TT
TT


SSB
S

GGGTTTTSSSSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence KNLEDDIKAIGVQRKISPNAYEDLLKEKKERLEQIEKYIDLIKVLKEKFDEQREIDKLRTEGIPQLPSGV
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Known secondary structure (DSSP) STTTTS
SS
SSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence KEVIKSSENAFALRLSPDRPDSFTRFDDPLFSLKRNRSQYEAGGYQRATDGLGARLRSELLPPDKDTPIV
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Known secondary structure (DSSP)
SS


SS

S




S



B
TTSTT

B

SSSS
SBTTB
 .........220.........230.........240.........250.........260.........270.........280
Sequence FNKKSLKDKIVDSVLVQLDKDFNTKDGDRGQKFEDIKKLVLEEYKKIDSELQVDEDTYHQPLNLDYLENI
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Known secondary structure (DSSP) S



TTS
SS

SSSS

SS

SSB
TT

B
ST
 .........290.........300.........310.........320.........330.........340.........350
Sequence ACTLDDNSTAKDWVYGIIGATTEADYWPKKKVSVFYEKQKEIKFESDTNTMSIKVQYLLAEINFYCKTNK
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Known secondary structure (DSSP) S



TT

S
STTSTT



TT
SS


STT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LSDANFGEFFDKEPHATEVAKRVKEGLVQGAEIEPIIYNYINSHHAELGLTSELSSKQQEEITEKFTQRY
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Known secondary structure (DSSP) S



TST

TTTTT
SS


 .........430.........440.........450.........460.........470.........480.........490
Sequence HIIENSPHFDEFFVADPDKKGNIFSHQGRMSCHFLDFFARQTKGKYPLGDLAGHQEALQAGTSNRLHHKN
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Known secondary structure (DSSP) TT
S

S
TTSSSS
TTTTT
S

GGGGGSSS
SB

SS
 .........500.........510.
Sequence EVVAQGYEKFDQFKKEVVKLL
Predicted secondary structure
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Known secondary structure (DSSP) TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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