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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6cnbR_

Fold library idPDB HeaderMoleculeTitle
c6cnbR_4.10PDB header: transcription/dnaChain: R: PDB Molecule: transcription factor iiib 70 kda subunit,tata-box-binding


Added to library: Sat Aug 25 08:43:27 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MPVCKNCHGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVALESREATLNNARRKLRAVSYALHIPEYI
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Known secondary structure (DSSP)



TTT





SSS


TTT

BS

S








TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence TDAAFQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHI
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Known secondary structure (DSSP) TTTTSSS
TT
S

TTSS

SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TELPLADPSLFIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRT
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Known secondary structure (DSSP)
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T
S
TTT

SSS
TT



 .........220.........230.........240.........250.........260.........270.........280
Sequence HTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKESGIVPTLQNIVAT
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Known secondary structure (DSSP) S
S
TSTTTTTS
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TT


S

 .........290.........300.........310.........320.........330.........340.........350
Sequence VTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARII
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Known secondary structure (DSSP)
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TSS
SS

TTT


BTTTTB




SSSSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence QKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIV
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Known secondary structure (DSSP) SSS





S


TTT

SSSSSSTTTT
TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LTGAKQREEIYQAFEAIYPVLSEFRKMSGSPRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEE
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Known secondary structure (DSSP) S
TTS








S

S

TS


TT

TTT

SS

 .........500.........510.........520..
Sequence ASKLKERIWIGLNADFLLEQESKRLKQEADIA
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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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