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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6cjtB_

Fold library idPDB HeaderMoleculeTitle
c6cjtB_3.46PDB header: transport proteinChain: B: PDB Molecule: sthk cyclic nucleotide-gated potassium channel;


Added to library: Sat Aug 4 09:07:56 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TYTLVWKVWILAVTLYYAIRIPLTLVFPSLFSPLLPLDILASLALIADIPLDLAFESRRLLAPSRLPDLL
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Known secondary structure (DSSP)

S
TTSSGGGTTTT




TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AALPLDLLVFALHLPSPLSLLSLVRLLKLISVQRSATRILSYRINPALLRLLSLVGFILLAAHGIACGWM
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Known secondary structure (DSSP) S

SST

GGGGGGGGSTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SLQPPSENPAGTRYLSAFYWTITTLTTIGYGDITPSTPTQTVYTIVIELLGAAMYGLVIGNIASLVSKLD
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Known secondary structure (DSSP) TS





TTTT



SS


SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence AAKLLHRERVERVTAFLSYKRISPELQRRIIEYFDYLWETRRGYEEREVLKELPHPLRLAVAMEIHGDVI
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Known secondary structure (DSSP) STTTT

TT

STTTTTSS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence EKVPLFKGAGEEFIRDIILHLEPVIYGPGEYIIRAGEMGSDVYFINRGSVEVLSADEKTRYAILSEGQFF
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Known secondary structure (DSSP) TT
SSSTT

TTS



TT

TTS





SS

TTS
S
TT
 .........360.........370.........380.........390......
Sequence GEMALILRAPRTATVRARAFCDLYRLDKETFDRILSRYPEIAAQIQ
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Known secondary structure (DSSP)

TTSS





S
S



TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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