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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6cfcA_

Fold library idPDB HeaderMoleculeTitle
c6cfcA_2.04PDB header: hydrolaseChain: A: PDB Molecule: lytic transglycosylase;


Added to library: Sat Jun 2 08:27:26 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YSIEKLKKEENSLAKDYYIYRLLEKNKISKKDAQDLNSHIFRYIGKIKSELEKINPKYAKCYTYTANTIL
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Known secondary structure (DSSP)

TS
SSTT


TTGGGG
S


TT

TTSGGGGT

TTTGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence DANLTCQSVRLNSLVFIASLNSKDRTTLAQTFKNQRPDLTNLLLAFNTSDPMSYIVQKEDINGFFKLYNY
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Known secondary structure (DSSP) GS
TT
S
TTT
TTSS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence SKKYDLDLNTSLVNKLPNHIGFKDFAQNIIIKKENPKFRHSMLEINPENVSEDSAFYLGVNALTYDKTEL
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Known secondary structure (DSSP)
TT





GGGSTTTT

GGG

GGG

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence AYDFFKKAAQSFKSQSNKDNAIFWMWLIKNNEEDLKTLSQSSSLNIYSLYAKELTNTPFPKIESLNPSKK
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Known secondary structure (DSSP)
SS

T
SS
STT










SB
 .........290.........300.........310.........320.........330.........340.........350
Sequence KNNFNMQDPFAWQKINKQIRDANASQLDVLAKEFDTQETLPIYAYILERKNNFKKHYFIMPYYDNIKDYN
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Known secondary structure (DSSP)

S

TT


T
BSTTTTT
S




TTGGGTTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence KTRQALILAIARQESRFIPTAISVSYALGMMQFMPFLANHIGEKELKIPNFDQDFMFKPEIAYYFGNYHL
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Known secondary structure (DSSP) TT
TT
B
TT

BTTTTB
TTS

TT

GGGGGS
 .........430.........440.........450.........460.........470.........480.........490
Sequence NYLESRLKSPLFVAYAYNGGIGFTNRMLARNDMFKTGKFEPFLSMELVPYQESRIYGKKVLANYIVYRHL
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Known secondary structure (DSSP)
S
STTSSSS
TTTTT
SS
 .........500......
Sequence LNDSIKISDIFENLIQ
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Known secondary structure (DSSP) TT



TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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