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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6cdin_

Fold library idPDB HeaderMoleculeTitle
c6cdin_3.60PDB header: viral proteinChain: N: PDB Molecule: pgt122 light chain;


Added to library: Sat May 19 08:30:24 2018
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTI
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Known secondary structure (DSSP)

TTTS
S


SS
B


TTS
SSSS


TTS
SS

TT
SS

 .........80.........90.........100.....
Sequence TSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVL
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SS confidence


































Known secondary structure (DSSP) SS

STT
S

BSSS


SS






Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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