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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6cddB_

Fold library idPDB HeaderMoleculeTitle
c6cddB_2.58PDB header: protein bindingChain: B: PDB Molecule: npl4 zinc finger;


Added to library: Sat Jul 7 08:27:04 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PWEVVRQSPLDDRLDKLDGKIPRKRGAMCRHGPKGMCDYCTPLDPFNPQYLEEKKIKYMSVHAYMRKINS
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Known secondary structure (DSSP)
TTT



T



B




TT

S
TT


TTTS
B
TT
TT
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ATNRPELGSSFIPPLVEPYYRVKRDCPSGHPQWPEGICTKCQPSAITLQPQPFRMVDHVEFASPQIIDRF
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Known secondary structure (DSSP) TT

GGG
TT



B




S

SS
TTSS
STTS


TTTS






S

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LDAWRRTGVQRLGILYGRYLEYDAVPLGIKAVVEAIYEPPQVDEIDGITLNPWENEQEVNQVAKYCGLEQ
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Known secondary structure (DSSP) TTSS

TTSTT

STT


TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VGVIWTDLLDAGKGDGSVVCKRHADSYFLAAQEIVFAARLQAQHPKPSKWSDTGRFGSNFVTCVVSGNEQ
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Known secondary structure (DSSP)

B
SSSSS
B


SSTTS
SS
TS

B
TTBTTSB
S



TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GEISISAYQMSNDAVEMVRADIIEPSADPTLMLVREETRYIPEVFYRKINEYGANVLENAKPAFPVEYLF
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Known secondary structure (DSSP) S

TT

SSTT









TTS


SGGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence VTLTHGFPDSPSPLFTDNIFPIENREYVGEAQEVSAVAKALKVHEADAPMNVSDFHLLCFIHQMSVLSKE
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Known secondary structure (DSSP)

SS


S




S

SSBGGGTB


TTTTSSS








S
 .........430.........440.........450......
Sequence EEALLCRVATLHDLAESFQLRSTTGWQTLHMILQST
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Known secondary structure (DSSP)

TST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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