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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6cc4A_

Fold library idPDB HeaderMoleculeTitle
c6cc4A_3.50PDB header: transport proteinChain: A: PDB Molecule: soluble cytochrome b562, lipid ii flippase murj chimera;


Added to library: Sat Jun 30 08:44:21 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQ
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Known secondary structure (DSSP)
T

STTS

GGGTTS
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATD
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Known secondary structure (DSSP) TT
TTGGGSS
S

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AFFVAFKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAGMLAAPWV
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Known secondary structure (DSSP) TTTT
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence IMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIPAFAPTLLNISMIGFALFAA
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Known secondary structure (DSSP)
GGGGGSSSTS
ST
 .........290.........300.........310.........320.........330.........340.........350
Sequence PYFNPPVLALAWAVTVGGVLQLVYQLPHLKKIGMLVLPRINFHDAGAMRVVKQMGPAILGVSVSQISLII
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Known secondary structure (DSSP) TTSSSTTT








SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence NTIFASFLASGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSFASGNHDEYNRLMDWGLRLCFLLAL
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Known secondary structure (DSSP) TS
TTTSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence PSAVALGILSGPLTVSLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIV
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Known secondary structure (DSSP) T
BTTB
STT


 .........500.........510.........520.........530.........540.........550.........560
Sequence TLILTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVVAVLVMSGVL
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Known secondary structure (DSSP) TTTS



S
 .........570.........580.........590.........600........
Sequence LGMLHIMPEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLGFKVKEFA
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Known secondary structure (DSSP) S

TTSS
TT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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