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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ca8A_

Fold library idPDB HeaderMoleculeTitle
c6ca8A_2.33PDB header: isomeraseChain: A: PDB Molecule: dna topoisomerase 2;


Added to library: Sat Feb 9 08:26:13 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RERIIGIPKLEDANDAGSKYSQECTLILTEGDSAKTSCLAGLSIVGRDKYGVFPLKGKLLNVRDASFKQL
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Known secondary structure (DSSP)




S
TT
B

TTTTSTTGGG

SSS
S



TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence MDNKEIQNIFRIMGLDITDKNKDDIKGLRYGSLMIMTDQDYDGSHIKGLLINMIHKFWPSLLKHKGFLSE
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Known secondary structure (DSSP)
T

SS

S

S
TT
S
S

SS
STTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FVTPIVKVQKGSQEYSFFTIAEYEQWKENTNLLGWKIKYYKGLGTSTDREFKQYFSDIKNHKIMFLWTGD
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Known secondary structure (DSSP)


SSSS

SSTS

SS


SGGGS
TGGGG

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence RDGDSIDMAFSKKRIEDRKLWLQNFILGSYVDHKEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPG
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Known secondary structure (DSSP)
TT
T

TT



TTSSTS
BTTT


 .........290.........300.........310.........320.........330.........340.........350
Sequence QRKVLYGCFKRNLRNECKVAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGSRKE
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Known secondary structure (DSSP) T

S
S


S


STTS
SS
SB

BS



TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence GGKDASAARYIFTKLASSTRSIFNEYDDPILKYLNEEGQKIEPQYYIPVIPTILVNGCEGIGTGYSSFIP
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Known secondary structure (DSSP) TTTT


TTT

B
TTTTGGGGGGS
TTS



SS


SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence NYNYKDIIDNIKRYINKEPLIPMVPWYKDFKGRIESNGKTGYETIGIINKIDNDTLEITELPIKKWTQDY
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Known secondary structure (DSSP)
B
TT






B

TT

S
SSS

SSS

TT

 .........500.........510.........520.........530.........540.........550.........560
Sequence KEFLEELLTDEKHQLILDYIDNSSHEDICFTIKMDPAKLQKAEEEGLEKVFKLKSTLTTTNMTLFDPNLK
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Known secondary structure (DSSP) SGGGTT

S


SS





TT

S

TTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence LQRYSTELDILKEFCYQRLKAYENRKSYLISKLEKEKRIISNKTKFILAIVNNELIVNKKKKKVLVEELY
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Known secondary structure (DSSP) SSTTSS

TT

 .........640.........650.........660.........670.........680.........690.........700
Sequence RKGYDPYKDINKEEIFEQELEDNEEIIAGITVKDYDYLLSMPIFSLTLEKVEDLLTQLKEKERELEILRN
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Known secondary structure (DSSP) TT








TT







BTTB
SGGGTS
GGGGS
 .........710.........720.........730.
Sequence ITVETMWLKDIEKVEEAIEFQRNVELSNREE
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Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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