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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6bxjA_

Fold library idPDB HeaderMoleculeTitle
c6bxjA_2.09PDB header: cell adhesionChain: A: PDB Molecule: chimera protein of integrin beta-3 and integrin alpha-l;


Added to library: Sat Oct 6 09:02:42 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLS
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Known secondary structure (DSSP)


TTTTT


S
TT


SS

TTS
SS


TTT
B








 .........80.........90.........100.........110.........120.........130.........140
Sequence DKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDGNVDLVFLFDGSMSLQPDEFQKILDFMKDVM
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Known secondary structure (DSSP)


SS
TT






TT


TTS

BTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence KKLSNTSYQFAAVQFSTSYKTEFDFSDYVKWKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGARP
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Known secondary structure (DSSP) TTTSSSSS


TTT




B


TS
GGGT

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence DATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDL
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Known secondary structure (DSSP) TSSS

SS



GGGTTSSGGG
STTGGGS
SSSSGGGGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence FTELQKKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKS
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Known secondary structure (DSSP) TTS
S

TT
STT
T


S

TT

S


SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence FTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEQDECSPR
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Known secondary structure (DSSP) TT
S



S
GGGGG
S
TTSTTT
STT

TT
BSTTS
B





SSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence EGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCN
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Known secondary structure (DSSP) SSS
GGGGSTT


SSS
STTS
SS
S
TTGGGSTT
TTSTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence CTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDEN
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Known secondary structure (DSSP)


GGGB
TTSSBGGGSTT
STT
BSTTS
B
TTSTTSS
STT
 .........570.........580.........590.........600.........610.........
Sequence TCNRYCRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECP
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Known secondary structure (DSSP)


SSS




SS
TTS

TTS
SS
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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