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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6bxfA_

Fold library idPDB HeaderMoleculeTitle
c6bxfA_3.20PDB header: cell adhesionChain: A: PDB Molecule: chimera protein of integrin beta-3 and integrin alpha-l;


Added to library: Sat Aug 4 08:36:06 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLS
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Known secondary structure (DSSP)


T


STT
TT



SS

S
S
S
TTTTTTS


STT
B








 .........80.........90.........100.........110.........120.........130.........140
Sequence DKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDGNVDLVFLFDGSMSLQPDEFQKILDFMKDVM
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Known secondary structure (DSSP)
SS


SS






TT


S



BTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence KKLSNTSYQFAAVQFSTSYKTEFDFSDYVKWKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGARP
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Known secondary structure (DSSP) TTTTTTSSS


STT




B


TTS
GGGT

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence DATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDL
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Known secondary structure (DSSP) TSSS

SS



GGGSSSBSGGG
STTGGGGGGGTS
SSB

BS
GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence FTELQKKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKS
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Known secondary structure (DSSP) TTTTSS
S

TTB



SSS
T


S

TT
B
S

S
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence FTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQ
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Known secondary structure (DSSP) TT
S



S
STTTT

SS
STT
TTTTT
SS

TTTT

SS

S



G
 .........430.........440.........450.........460...
Sequence DECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCETREL
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Known secondary structure (DSSP) GGGSSSTTS
GGGGSTT


SS

B
STTS

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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