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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c6btmA_ | 3.40 | PDB header: membrane protein | Chain: A: PDB Molecule: alternative complex iii subunit a; |
Added to library: Sat May 12 08:23:21 2018 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | V | L | V | T | S | I | F | L | L | L | A | S | G | Y | F | V | Y | G | Y | L | M | Q | V | G | V | D | Q | N | Y | E | P | I | Q | P | I | H | Y | S | H | K | I | H | A | G | D | N | E | I | N | C | K | Y | C | H | S | A | A | R | V | S | K | T | A | G | I | P | S | L | N | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | T | T | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | ![]() | ![]() | ![]() | ![]() | S | T | T | T | T | S | S | T | T | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | C | M | N | C | H | K | N | I | S | E | V | A | E | T | T | A | T | A | E | Y | S | K | A | F | Y | D | A | Q | I | Q | K | L | Y | D | A | V | G | W | D | K | T | K | Q | A | Y | T | G | K | T | Q | P | V | K | W | V | R | I | H | N | L | P | D | F | V | Y | F | N | H | S | Q |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | S | T | T | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | T | T | T | T | ![]() | ![]() | S | T | T | S | S | T |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | H | V | S | V | A | G | V | E | C | Q | T | C | H | G | P | V | Q | E | F | E | I | M | K | Q | Y | S | K | L | T | M | G | W | C | V | D | C | H | R | K | T | D | V | K | M | E | G | N | A | Y | Y | E | K | I | H | A | E | L | S | K | K | Y | G | V | E | K | L | T | A | A | Q |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | S | S | T | T | T | T | T | G | G | G | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | B | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | S | S | S | T | T | T | T | S | B | T | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | ||||||||
Sequence | M | G | G | L | E | C | G | K | C | H | Y | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | T | T | T | T | S |
Download: | PDB structure | FASTA sequence |
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