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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6brhA_

Fold library idPDB HeaderMoleculeTitle
c6brhA_3.40PDB header: hydrolaseChain: A: PDB Molecule: deoxynucleoside triphosphate triphosphohydrolase samhd1;


Added to library: Sat Feb 17 08:25:39 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TDLRTWEPEDVCSFLENRGFREKKVLDIFRDNKIAGSFLPFLDEDRLEDLGVSSLEERKKMIECIQQLSQ
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Known secondary structure (DSSP)

STT

TT


TT

GGGGGG

T


TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SRIDLMKVFNDPIHGHIEFHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLV
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Known secondary structure (DSSP)
STTS
TTT
SSGGGGSBTTGGGGGT
TT


B
 .........150.........160.........170.........180.........190.........200.........210
Sequence RALAEKQPELQISERDILCVQIAGLCHDLGHGPFSHMFDGRFIPRARPEKKWKHEQGSIEMFEHLVNSNE
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Known secondary structure (DSSP)
GGG


TTTTT
BTTBT
TTS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LKLVMKNYGLVPEEDITFIKEQIMGPLWPYKGRPATKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQN
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Known secondary structure (DSSP) TT







SSS
GGGGGGGGTS

TTTT
ST


 .........290.........300.........310.........320.........330.........340.........350
Sequence NFDYKRFIKFARICEVEYKVYIRKVKHICSREKEVGNLYDMFHTRNCLHRRAYQHKISNLIDIMITDAFL
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Known secondary structure (DSSP)


T


GGGTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence KADPYVEITGTAGKKFRISTAIDDMEAFTKLTDNIFLEVLHSTDPQLSEAQSILRNIECRNLYKYLGETQ
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Known secondary structure (DSSP) TTT


GGG

TTTGGG
TT
STT


GGGTT



 .........430.........440.........450.........460.........470.........480.........490
Sequence PKREKIRKEEYERLPQEVAKAKPVELKAEDFIVDVINVDRVHFYEQLIRVYCKKKDGKSLDAAGKHFVQW
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Known secondary structure (DSSP) BSSS


TTGGGG






GGG





S

S
 .........500
Sequence CALRDFTKPQ
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Known secondary structure (DSSP) TTB




Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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