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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6bqnB_

Fold library idPDB HeaderMoleculeTitle
c6bqnB_3.90PDB header: membrane proteinChain: B: PDB Molecule: scnn1b;


Added to library: Sat Oct 13 08:40:16 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXTYLSWEVSVSLSVGFKTMDFPAVTICNASPFKYSKIKHLLKDLDE
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Known secondary structure (DSSP)
TT








SS
B
GGGTTTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LMEAVLERILAPATRNLNFSIWNHTPLVLIDERNPHHPMVLDLFGASEKICNAHGCKMAMRLCSLNRTQC
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Known secondary structure (DSSP)



SS

TTS

S
SSS









S



SSS
B
SS
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TFRNFTSATQALTEWYILQATNIFAQVPQQELVEMSYPGEQMILACLFGAEPCNYRNFTSIFYPHYGNCY
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Known secondary structure (DSSP) B

B
S
TTTS
TB


SSSB

STT
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IFNWGMTEKALPSANPGTEFGLKLILDIGQEDYVPFLASTAGVRLMLHEQRSYPFIRDEGIYAMSGTETS
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Known secondary structure (DSSP) S

TTTS



S

SSSS

GGGS
TTT





SSS


TTTS

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence IGVLVDKLQRMGEPYSPCTVNGSEVPVQNFYSDYNTTYSIQACLRSCFQDHMIRNCNCGHYLYPLPRGEK
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Known secondary structure (DSSP)

S


SSS
S
SS

TTTTTT



SSSSB
TTS


TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence YCNNRDFPDWAHCYSDLQMSVAQRETCIGMCKESCNDTQYKMTISMADWPSEASEDWIFHVLSQERDQST
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Known secondary structure (DSSP) B

TTT
TTT
S


S


S
TTTTTTTTTT

SS
 .........430.........440.........450.........460.........470.........
Sequence NITLSRKGIVKLNIYFQEFNYRTIEESAANNIXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)




TT



STTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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