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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6bqnA_

Fold library idPDB HeaderMoleculeTitle
c6bqnA_3.90PDB header: membrane proteinChain: A: PDB Molecule: scnn1a;


Added to library: Sat Oct 13 08:41:41 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPVSLNINLNSDKLVFPAVTICTLNPYRYPEIKEELEELD
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Known secondary structure (DSSP)
TTSSTTSSSTTTT








B



SB



TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RITEQTLFDLYKYTLPHPLQAKIGFQLCNQNKSDCFYQTYSSGVDAVAEWYAFHYINILSRLPETLPSLE
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Known secondary structure (DSSP) TS



S










TT
S




SSGGGS

S

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EDTLGNFIFACRFNQVSCNQANYSHFHHPMYGNCYTFNDKNNSNLWMSSMPGINNGLSLMLRAEQNDFIP
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Known secondary structure (DSSP)

GGGTSTTB

TT




BTTTB
S



STT

B
SSS
TTTS

SS
S
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLSTVTGARVMVHGQDEPAFMDDGGFNLRPGVETSISMRKETLDRLGGDYGDCTKNGSDVPVENLYPSKY
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Known secondary structure (DSSP) TT






SSS



SS


TT


TTTSSSSTTS
SS


SSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence TQQVCIHSCFQESMIKECGCAYIFYPRPQNVEYCDYRKHSSWGYCYYKLQVDFSSDHLGCFTKCRKPCSV
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Known secondary structure (DSSP)
SSS


SSS


TTS



TTT
TTTTT
S
S
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence TSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKELNYKTNSESPSVTXXXXXXXX
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Known secondary structure (DSSP)

S

TT




SS


S
S





TT
 .........430.........
Sequence XXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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