Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6bo5D_

Fold library idPDB HeaderMoleculeTitle
c6bo5D_3.60PDB header: membrane proteinChain: D: PDB Molecule: transient receptor potential cation channel subfamily v


Added to library: Sat Dec 8 09:05:09 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DRLFSVVSRGEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKPLVNAQCTDEFYQGHSALHIAIEKRSLQ
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)


TTTT

S
TTT





TTTT

B
SSTTBT

TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence CVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNT
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP) SSTTT

SS



STTSTTSTTS
TTS
SSTT
TS
SS



TT


TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence VLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) T

S
TTTS
S

TTT


SS


T
T

 .........220.........230.........240.........250.........260.........270.........280
Sequence FSGPYQPLSRKFTEWCYGPVRVSLYDLSSVDSWEKNSVLEIIAFHCKSPNRHRMVVLEPLNKLLQEKWDR
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)
SSS
STT


S

SS


TTTT

SS

TTS
S

SS
SGGGGSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LVSRFFFNFACYLVYMFIFTVVAYHQPSLDQPAIPSSKATFGESMLLLGHILILLGGIYLLLGQLWYFWR
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) TGGGGT

S
S
SS


SSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence RRLFIWISFMDSYFEILFLLQALLTVLSQVLRFMETEWYLPLLVLSLVLGWLNLLYYTRGFQHTGIYSVM
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP)

S
SSSS
S
TT
STTTS


STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence IQKVILRDLLRFLLVYLVFLFGFAVALVSDASLELFKFTIGMGELAFQEQLRFRGVVLLLLLAYVLLTYV
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP) T

TT
SS







SSS

TTTT
 .........500.........510.........520.........530.........540.........550.......
Sequence LLLNMLIALMSETVNHVADNSWSIWKLQKAISVLEMENGYWWCRRKKHREGRLLKVGTRGDGTPDER
Predicted secondary structure













SS confidence


































































Known secondary structure (DSSP) TTTS
SS





S







S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D