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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6bm8A_

Fold library idPDB HeaderMoleculeTitle
c6bm8A_4.10PDB header: viral proteinChain: A: PDB Molecule: envelope glycoprotein b;


Added to library: Sat May 19 08:25:40 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RDIKAENTDANFYVCPPPTGATVVQFEQPRRCPTRPEGQNYTEGIAVVFKENIAPYKFKATMYYKDVTVS
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Known secondary structure (DSSP)




S
TTS





SS


















S
 .........80.........90.........100.........110.........120.........130.........140
Sequence QVWFGHRYSQFMGIFEDRAPVPFEEVIDKINAKGVCRSTAKYVRNNLETTAFHRDDHETDMELKPANAAT
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Known secondary structure (DSSP) TT






TSSTTGGGS







S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RTSRGWHTTDLKYNPSRVEAFHRYGTTVNCIVEEVDARSVYPYDEFVLATGDFVYMSPFYGYREGSHTEH
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Known secondary structure (DSSP) SS

S
SS






TT


TT
S
TTS

B
TT
SSSSSGGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TSYAADRFKQVDGFYARDLTTKARATAPTTRNLLTTPKFTVAWDWVPKRPSVCTMTKWQEVDEMLRSEYG
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Known secondary structure (DSSP) BSS
TTT


B
SSS

B
SS

SS



STTT

ST
 .........290.........300.........310.........320.........330.........340.........350
Sequence GSFRFSSDAISTTFTTNLTEYPLSRVDLGDCIGKDARDAMDRIFARRYNATHIKVGQPQYYLANGGFLIA
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Known secondary structure (DSSP) TTTTTB


SS


GGGBSSTTTTT
SS
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YQPLLSNTLAELYVREHLREQSRKPPNPTPPASVERIKTTSSIEFARLQFTYNHIQRHVNDMLGRVAIAW
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Known secondary structure (DSSP) GGGGGGTTS

TTS




B




S

 .........430.........440.........450.........460.........470.........480.........490
Sequence CELQNHELTLWNEARKLNPNAIASVTVGRRVSARMLGDVMAVSTCVPVAADNVIVQNSMRISSRPGACYS
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Known secondary structure (DSSP)
SS

SSS

GGG

SB
S
SSSTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence RPLVSFRYEDQGPLVEGQLGENNELRLTRDAIEPCTVGHRRYFTFGGGYVYFEEYAYSHQLSRADITTVS
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Known secondary structure (DSSP) S

SSSSS


GGGBSS




TT
TTSSB
STTS



 .........570.........580.........590.........600.........610.........620.........630
Sequence TFIDLNITMLEDHEFVPLEVYTRHEIKDSGLLDYTEVQRRNQLHDLRFADIDTVIHADANAAVMGIVGGV
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Known secondary structure (DSSP) S

















SS
TTSS

T
TTTTT


S





TTT

 .........640.........650.........660.....
Sequence VSAVSGVSSFMSNPFGALAVGLLVLAGLAAAFFAF
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Known secondary structure (DSSP) TS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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