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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6beaA_

Fold library idPDB HeaderMoleculeTitle
c6beaA_1.97PDB header: protein bindingChain: A: PDB Molecule: autotransporter protein upab;


Added to library: Sat Apr 13 10:37:09 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence STVSTDPVTLNTEKTTLDQDVVINGDNKITAVTIETSDSDKDLNVTFGGHDITATSTVNQDFVEGVKVSG
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Known secondary structure (DSSP)

SS
BTTB
B

SSS

TT
SS

TT



SSS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence NKNVVINATDSTITAQGEGTYVRTAMVIDSTGDVVVNGGNFVAKNEKGSATGISLEATTGNNLTLNGTTI
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Known secondary structure (DSSP) SS

TT



SS


SS
S

SSS


TT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NAQGNKSYSNGSTAIFAQKGNLLQGFDGDATDNITLADSNIINGGIETIVTAGNKTGIHTVNLNIKDGSV
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Known secondary structure (DSSP)

TTSTTS

SSS


S


TTSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IGAANNKQTIYASASAQGAGSATQNLNLSVADSTIYSDVLALSESENSASTTTNVNMNVARSYWEGNAYT
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Known secondary structure (DSSP) SBTTB
TT
S
TT
S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence FNSGDKAGSDLDINLSDSSVWKGKVSGAGDASVSLQNGSVWNVTGSSTVDALAVKDSTVNITKATVNTGT
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Known secondary structure (DSSP) STTSS

SS
SS

S
S

SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence FASQNGTLIVDASSENTLDISGKASGDLRVYSAGSLDLINEQTAFISTGKDSTLKATGTTEGGLYQYDLT
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Known secondary structure (DSSP)

TTS


SS



BSS


TT


TT



TT
 .........430...
Sequence QGADGNFYFVKNT
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Known secondary structure (DSSP)
TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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