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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6bc1D_

Fold library idPDB HeaderMoleculeTitle
c6bc1D_2.90PDB header: signaling proteinChain: D: PDB Molecule: rho guanine nucleotide exchange factor 28;


Added to library: Sat Dec 16 08:22:29 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence EKNQKWLEILNKIENKTYTKLKNGHVFRKQALMERTLLYDGLVYWKTATGRFKDILALLLTDVLLFLQEK
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Known secondary structure (DSSP)
B
TT

TTS
GGGG



TTS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DQKYIFAAVDQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESC
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Known secondary structure (DSSP) TT

STT

SST


SS
TT
TT



SS
 .
Sequence P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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