PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6b85J_

Fold library id	PDB Header	Molecule	Title
c6b85J_	3.89	PDB header: membrane protein	Chain: J: PDB Molecule: tmhc4_r;

Links to external resources
Added to library: Sat Mar 17 09:13:42 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S K D T E D S R K I W R T I M L L L V F A I L L S A I I W Y Q I T T N P D T S Q I A T L L S M Q L L L I A L M L V V I A L L L S R Q T E Q V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A E S I R R D V S A L A Y V M L G L L L S L L N R L S L A A E A Y K K A I E L D P N D A L A W L L L G S V L E K L K R L D E A A E A Y K K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I E L K P N D A S A W K E L G K V L E K L G R L D E A A E A Y K K A I E L D P E D A E A W K E L G K V L E K L G R L D E A A E A Y K K A I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T
T T

. . . . .

Sequence L D P N D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	K	D	T	E	D	S	R	K	I	W	R	T	I	M	L	L	L	V	F	A	I	L	L	S	A	I	I	W	Y	Q	I	T	T	N	P	D	T	S	Q	I	A	T	L	L	S	M	Q	L	L	L	I	A	L	M	L	V	V	I	A	L	L	L	S	R	Q	T	E	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	E	S	I	R	R	D	V	S	A	L	A	Y	V	M	L	G	L	L	L	S	L	L	N	R	L	S	L	A	A	E	A	Y	K	K	A	I	E	L	D	P	N	D	A	L	A	W	L	L	L	G	S	V	L	E	K	L	K	R	L	D	E	A	A	E	A	Y	K	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T																	T	T															T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	E	L	K	P	N	D	A	S	A	W	K	E	L	G	K	V	L	E	K	L	G	R	L	D	E	A	A	E	A	Y	K	K	A	I	E	L	D	P	E	D	A	E	A	W	K	E	L	G	K	V	L	E	K	L	G	R	L	D	E	A	A	E	A	Y	K	K	A	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T															T	T																	T	T															T	T
	.	.	.	.	.
Sequence	L	D	P	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T