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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6b4fB_

Fold library idPDB HeaderMoleculeTitle
c6b4fB_2.81PDB header: transport proteinChain: B: PDB Molecule: nucleoporin gle1;


Added to library: Sat Jun 23 08:23:17 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DITMQWYQQLQDASMQCVLTFEGLTNSKDSQAKKIKMDLQKAATIPVSQISTIAGSKLKEIFDKIHSLLS
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Known secondary structure (DSSP)
TTTTSS

STTTT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GKPVQSGGRSVSVTLNPQGLDFVQYKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGDLILAH
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Known secondary structure (DSSP) T


SSS

TT
TTTT
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence LHKKCPYSVPFYPTFKEGMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQEI
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Known secondary structure (DSSP)
GGGTT





SSS
TT

B
SS
B

STT



TT


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence HPHGLNHGWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRIEAITSSG
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Known secondary structure (DSSP)
TT
TTS


TTSTTTS
GG
 .........290.........300.........310.....
Sequence QMGSFIRLKQFLEKCLQHKDIPVPKGFLTSSFWRS
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Known secondary structure (DSSP) G
TS



TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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