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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6b0nG_

Fold library idPDB HeaderMoleculeTitle
c6b0nG_3.40PDB header: viral protein/immune systemChain: G: PDB Molecule: envelope glycoprotein gp140;


Added to library: Sat Jun 2 08:28:46 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ENLWVTVYYGVPVWKDAETTLFCASDAKAYEEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVE
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Known secondary structure (DSSP)


S


















SS
SS
SB


SS


TT


STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDV
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Known secondary structure (DSSP) TTS
B
GGG
S

S










SSSS

GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence VQINSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIK
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Known secondary structure (DSSP)



TTTTT




SSS





B

TT

TT

SSSSSB


B
 .........220.........230.........240.........250.........260.........270.........280
Sequence PVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDII
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Known secondary structure (DSSP)


BSSS



SSS

S
TT
SSS

SS


B

TT


B
 .........290.........300.........310.........320.........330.........340.........350
Sequence GDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNS
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Known secondary structure (DSSP) S




SS




S

TTT

TTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TWISNTSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGG
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Known secondary structure (DSSP) S




S
GGG
SS






S

B


S

SS





 .........430.........440.........450.........460.........470.........480.........490
Sequence DMRDNWRSELYKYKVVKIEPLGVAPTRAKRRVVGGGSAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNL
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Known secondary structure (DSSP)
STTTGGG



S




TT




S






TTGGGSS
TT

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence LSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTNVPWNSSW
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Known secondary structure (DSSP) SS
SSTT
STTTT
STTTTTTTTTSTS
TT
S

TTS
 .........570.........580.........590.........600.........610
Sequence SNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
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Known secondary structure (DSSP)



S

GGGTTTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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