Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ar3A_

Fold library idPDB HeaderMoleculeTitle
c6ar3A_3.41PDB header: rna binding protein/rna/dnaChain: A: PDB Molecule: gsi-iic rt;


Added to library: Sat Dec 2 08:25:35 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALLERILARDNLITALKRVEANQGAPGIDGVSTDQLRDYIRAHWSTIHAQLLAGTYRPAPVRRVEIPKPG
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
S
T



SS


TTSTT






TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GGTRQLGIPTVVDRLIQQAILQELTPIFDPDFSSSSFGFRPGRNAHDAVRQAQGYIQEGYRYVVDXDLEK
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) SS

GGGS
TTB
TT
TT

T


BTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FFDRVNHDILXSRVARKVKDKRVLKLIRAYLQAGVXIEGVKVQTEEGTPQGGPLSPLLANILLDDLDKEL
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) GGGS
BTTT




TT

SB


TT
SST
 .........220.........230.........240.........250.........260.........270.........280
Sequence EKRGLKFCRYADDCNIYVKSLRAGQRVKQSIQRFLEKTLKLKVNEEKSAVDRPWKRAFLGFSFTPERKAR
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) TT
TTS
TS


B
TTT
B


TTTS
BTT
SSSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence IRLAPRSIQRLKQRIRQLTNPNWSISXPERIHRVNQYVXGWIGYFRLVETPSVLQTIEGWIRRRLRLCQW
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP)
S
SS



GGG
S
 .........360.........370.........380.........390.........400.........410........
Sequence LQWKRVRTRIRELRALGLKETAVXEIANTRKGAWRTTKTPQLHQALGKTYWTAQGLKSLTQRYFELRQ
Predicted secondary structure

























SS confidence



































































Known secondary structure (DSSP) S
ST

T

S
TTSSTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D