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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ap4B_

Fold library idPDB HeaderMoleculeTitle
c6ap4B_2.95PDB header: transferaseChain: B: PDB Molecule: dna polymerase iii subunit beta;


Added to library: Sat Dec 23 08:29:14 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HHMRLKIAKESLLNVLSHVVGAVERRHTLNILSNVKIQTNAQALTITGSDLEVELVASTALSEGACLEAG
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Known secondary structure (DSSP)


TTTTS

SS
SSGGGG
SS
SS

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ETTVPARKLMEICKSLPTAALIDLQITEDQRCILKSGNSRFVLGTLPAEDYPLLTTENSQGTQVQVTQRE
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Known secondary structure (DSSP) S
TT

SSSTT
B
GGGS









 .........150.........160.........170.........180.........190.........200.........210
Sequence LKRLFEKTAFAMAVQDVRFYLTGTLLEIDENQLRAVTTDGHRLALCEILASSTSSQLVQAIVPRKAVGEL
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Known secondary structure (DSSP) TTGGGS
SS
SSGGGGTT
SS
S
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QRLLSIEDEQLTLLIGRELLNVTINTPSRDKEQGDITVRFTTKLIDGKFPDYRRVIPRGGDKHVLIGHDV
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Known secondary structure (DSSP)

SS


SS


STT





S



S




 .........290.........300.........310.........320.........330.........340.........350
Sequence FKQSLQRVAILSNEKLRGVFLNFNQDSLQLRANNPEQDEAIEDLAIQYQSAPLEMSFNAQYLLDVLGVLD
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Known secondary structure (DSSP) TTS
TTT
TT
TT



SSSSSS

 .........360.........370.........380..
Sequence GDDVNMSMTEANQSVLVQDPAHPDQTYVVMPM
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Known secondary structure (DSSP) SSS
SSS

SS
TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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