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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6akdA_

Fold library idPDB HeaderMoleculeTitle
c6akdA_2.10PDB header: ligaseChain: A: PDB Molecule: amp-dependent synthetase and ligase;


Added to library: Sat Mar 9 16:05:55 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LDHGLHARFLRGLSAAPDGAAVRIGTTSVSYRHLHRTALLWAGALTAAGARSVGVLAGKSATGYAGILAA
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Known secondary structure (DSSP)

SST
TTSTTTT
S

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LYAGAAVVPLRPDFPAARTREVLRASDADVLIADRAGLPVLAGALAGDVPVLAPDALDGELPEGVARLVP
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Known secondary structure (DSSP) TT

TTS
T
S
TTTT





TT

GGGS
TT

B


 .........150.........160.........170.........180.........190.........200.........210
Sequence RPELSLSEPARCKPADPAYLLFTSPKGVVITHGATGHYFDVMERRYDFGASDVFSQAFDLNFDCAVFDLF
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Known secondary structure (DSSP)
GGG

SS




TTS



TT



TT

S
TTST
 .........220.........230.........240.........250.........260.........270.........280
Sequence CAWGAGATVVPVPPPAYRDLPGFITAQGITVWFSTPSVIDLTRRLGALDGPRMPGLRWSLFAGEALKCRD
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Known secondary structure (DSSP) TT


GGGGG
T


TTT

SSS

TT

SS

B
 .........290.........300.........310.........320.........330.........340.........350
Sequence AADWRAAAPGATLENLYGPTELTITVAAHRWDDEESPRAAVNGLAPIGAVNDGHDHLLLGGDPSPDEGEL
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Known secondary structure (DSSP) STTS

GGGSS



TTT
BTTB


B
TT



B
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence WVTGPQLAAGYLDPADERGRFAERDGRRWYRTGDRVRRAPGGDLVYVGRLDSQLQVVEPAEVEHAVRACG
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Known secondary structure (DSSP) STT

SSSGGGGBTTTT
TTS
GGG





TT
 .........430.........440.........450.........460.........470.........480........
Sequence ADDAVVVGVTELVAFYTGIPVEPRELVRRLREVVPLPRHFRHLDAFPLNANRKTDRLRLTTMAADGYG
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Known secondary structure (DSSP)
S


SS






S
SS

B
TTSSB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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