Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ah3B_

Fold library idPDB HeaderMoleculeTitle
c6ah3B_3.48PDB header: hydrolase/rnaChain: B: PDB Molecule: ribonucleases p/mrp protein subunit pop1;


Added to library: Sat Oct 20 08:43:48 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSKLNVDQFISSRQFEVKQLQLAMHNSKAASSTRIFQALPRKLRRRTASHNVRRIPKRMRNRALREMRKS
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)




S


SGGGS
TTT

GGGTT
GGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DAHGLNAKQLYKARMSIKLLRLASKSTSMKLSMPPEVTSSNCHVRQKIKTLKRMIKESSTANPNIKLLNN
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)





TTTTB




S
S
SSS

B
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RMGSYDCTGVNELAPIPKGRVKYTKRQKHFAWLPTHIWNAKRSHMMKRWGYQMVWAPTQKCFKLTHRLGG
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) SS





SS







STTSGGGSSS


TT


SSS

SS

TS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DTCSSDGALCMDSSYIGTIIVKDKSNDSEGDFLKSIIGKLTAERANLRKYREGQVLFQGLIYSFNEENGE
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) SSS


S
TTS

S
SSS
S
TTS

S




BSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DSTKPLGPCDVFWVQKDTAIIRLHPSIYTQVFNILLQHKEKLTVQDCRYSLASVTLKGAKALESLASCLR
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) B

TTT
S
SSSSSS
SSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence STEYSKSFEQFKMVSMITDHNALPQRCTFAFEAIDPRHLAAPKKLNDSQRKTVNSDDILSLHENYPQDEI
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) BSS



STTS
S



GGGT
S






GGG





 .........430.........440.........450.........460.........470.........480.........490
Sequence NAVFNELCDPESRTQSYNNQNTLKEISARRYKLLTATKTTVPFKESDDPSIPLVIIRRLKTRDWIVVLPW
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) SGGGG










TTTS

TTTT
T
 .........500.........510.........520.........530.........540.........550.........560
Sequence FWLLPLWHLLNRIPRMYHIGLRQFQQIQYENKQLYFPDDYPFTQLGYIENSFYKKEASKTKWDRKPMGKR
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) TTTTTTSTT


TT




SSS
TTTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence INFEKIKDIHNTKLPAYSGEIGDFFSSDWRFLQILRNGIDYLQRNDKTLELMDGVRDINCVNDVLEFCKD
Predicted secondary structure




























































SS confidence





































































Known secondary structure (DSSP)

SS



SSSS

TT

S
SS
SSS


SS










S
 .........640.........650.........660.........670.........680.........690.........700
Sequence YEAKTKAMSLSIEENIPVALCKNRKCQFRTSFSLTFFPRCIIAVSCTLLERGHPKDNARIYQVPEKDLEH
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) TTS


S

S

BSTTTTTTTTT




SSSS



SS



SS


SSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence WLQLAKGVYRPNGRKDHDLKIPLPEVHDLIGFITSGTYHLNCGNGMGIGFIDHHAAIRQPTRYVLIRNVG
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)



TTSS



S





GGG

TTTT
SS

SS
 .........780....
Sequence TNTYRLGEWSKISV
Predicted secondary structure



SS confidence













Known secondary structure (DSSP)







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D