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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ab6A_

Fold library idPDB HeaderMoleculeTitle
c6ab6A_3.50PDB header: virus like particleChain: A: PDB Molecule: capsid protein;


Added to library: Sat Mar 23 08:19:49 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ISRLGPDSDFLTSVVAKASTSIVTPADRILVKQPLSASSFPGTRITGLSSYWERYKWLSAVARYVPAVPN
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Known secondary structure (DSSP)






STT

SGGGG
STTSSTTSTTSSSS

S
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence TVACQFVMYIDTDPLDDPSNISDDNQIVRQAVSQAGSNQFNFNTSKTVPLIVRADNQYYYTGVDKQNLRF
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Known secondary structure (DSSP) T
B
SSSS

GGG


TTTSTT
TTS




SS



SS

S
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SLQGILYIIQVTDLINFNGELITQDLTCGSLFLDWLVNFSIPQINPTSLTDVRVDKAVNFIKPEVSGVAE
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Known secondary structure (DSSP) S
S

S

B
TTS
B

S
S



SS







SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IQTVTGLSPSTSYLLTPAFLEQNFQSEAGIYILSATPVEGEGTISINMDPTVTTVSGFIKVKTDTFGTFD
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Known secondary structure (DSSP)
SS
TT
B


S

TTSSSS

SSS
SSS
B

TTS
 .........290.........300...
Sequence LSVVLTTASKKQTTGFNIIAATS
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Known secondary structure (DSSP) S
TT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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