Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6a8kA_

Fold library idPDB HeaderMoleculeTitle
c6a8kA_1.40PDB header: antifreeze proteinChain: A: PDB Molecule: ice binding protein 1;


Added to library: Sat Nov 10 08:26:27 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALPPSPPAVNLGTAEDFVILAKAGVTNVPGGAITGDIGVSPIAASAMTGFDLVMDSSNEFSTSTEITGKA
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)










GGGGG
SSS
SS
S

SS
GGGSS


TTSS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YAPDYMSPTGTKLTTAVSDMLTAYNDAAARPVTGGPFGNSLSGETYTNLGAGEIGGLTLTRGVYTYDINV
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)
TTSSTTT




SBSSSTTSS
BSBSGGGGB
TT

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SITSGKVTFHGGADDVFIIKTSKSVLQAANTEVVLTGGAQAKNIFWSVAQEVNVGAGAHMEGILLVKTAV
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
SS

TT

SS

TT
TT

GGGSS

TT
SS
 .........220.........230.........240....
Sequence KFITGSSFVGRVLSATAVTLQSAAITAPATSAPT
Predicted secondary structure














SS confidence

































Known secondary structure (DSSP)
TT
SS
S

TTTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D