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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6a69A_

Fold library idPDB HeaderMoleculeTitle
c6a69A_4.11PDB header: structural proteinChain: A: PDB Molecule: plasma membrane calcium-transporting atpase 1;


Added to library: Sat Sep 22 09:47:50 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GDMANNSVAYSGVKNSLKEANHDGDFGITLAELRALPNEGLSGNPADLERREAVFGKNFIPPKKPKTFLQ
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Known secondary structure (DSSP)

S

SSSSSSS
S
SSSSTT
STTT


TT


S
TTTT








S

 .........80.........90.........100.........110.........120.........130.........140
Sequence LVWEALQDVTLIILEIAAIVSLGLSFYQPETGWIEGAAILLSVVCVVLVTAFNDWSKEKQFRGLQSRIEQ
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Known secondary structure (DSSP) TT
TTSS



TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EQKFTVIRGGQVIQIPVADITVGDIAQVKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKSLDKDPLL
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Known secondary structure (DSSP) S
B

B
STTS
B

BSTT

SS


BTT
B
SS

S





TTTSS

S
B


SSS


B
 .........220.........230.........240.........250.........260.........270.........280
Sequence LSGTHVMEGSGRMVVTAVGVNSQTGIIFTLSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWV
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Known secondary structure (DSSP)
TT
B
B




GGGS


STTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QKRPWLAECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNA
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Known secondary structure (DSSP) S
S


SS

S
S
STTTTT
STTTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TAICSDKTGTLTMNRMTVVQAYINEKHYKKVPPNILSYLVTGISVNCAYTSKILPPEKEGGLPRHVGNKT
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Known secondary structure (DSSP)

STTTTB
S





SSSS





SS
S







SSSSSS




S
 .........430.........440.........450.........460.........470.........480.........490
Sequence ECALLGLLLDLKRDYQDVRNEIPYKVYTFNSVRKSMSTVLKYRIFSKGASEIILKKCFKILSANGEAKVF
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Known secondary structure (DSSP) TTSTTS

TTS






S
SSS





TTS

TTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence RPRDRDDIVKTVIEPMASEGLRTICLAFRDGLTCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMVTGDNI
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Known secondary structure (DSSP)
T




TTSSSS
S








BB






B
SSTT

S

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence NTARAIATKCGILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIID
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Known secondary structure (DSSP) TSS
TTS





SSTTSSS

SSS


TTTTT
S
S

SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence STVSDQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSI
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Known secondary structure (DSSP) S
SSSS


BB




TT
SSB

B
SSS

T
SSS

 .........710.........720.........730.........740.........750.........760.........770
Sequence SKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEPPTESLLLRKPYGRNKP
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Known secondary structure (DSSP) SSS
SS
TTTTS




SGGGSS



TTS
 .........780.........790.........800.........810.........820.........830.........840
Sequence LISRTMMKNILGHAFYQLVVVFTLLFAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARK
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Known secondary structure (DSSP) SS
STTTSSS




S

SS



STT
 .........850.........860.........870.........880.........890.........900.........910
Sequence IHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGGKPFSCSELSIEQWLWSIFLGMGTLLWGQLISTIP
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Known secondary structure (DSSP)
SS


TTS
TTS
SSSTTTTT




TTTTSS
 .
Sequence T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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