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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5zypA_

Fold library idPDB HeaderMoleculeTitle
c5zypA_2.53PDB header: transcriptionChain: A: PDB Molecule: rna polymerase-associated protein ctr9,rna polymerase ii-


Added to library: Sat Sep 29 08:39:47 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YPSXEWPTSLDIPLKASEELVGIDLETDLPDDPTDLKTLLVEENSEKEHWLTIALAYCNHGKTNEGIKLI
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Known secondary structure (DSSP)






S
SSSS
TTT


SSTTT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EXALDVFQNSERASLHTFLTWAHLNLAKGQSLSVETKEHELTQAELNLKDAIGFDPTWIGNXLATVELYY
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Known secondary structure (DSSP) TTTS
GGGGT
TT


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLRAKLLYQKKNYXASLKIFQELLVINPVLQPD
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Known secondary structure (DSSP) TT
TT





TT

TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PRIGIGLCFWQLKDSKXAIKSWQRALQLNPKNTSASILVLLGEFRALSDLNNIFSENQVLLTLLQTYYQL
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Known secondary structure (DSSP) TT

TT



TTT

TT


 .........290.........300.........310.........320.........330.........340
Sequence INSLYIKTNVTNLIQQDEDLGXPVDLXKFPGLLNKLDSKLLYGFDNVKLDKDDRILLRDP
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Known secondary structure (DSSP) T

TTTT



GGGSTTS

GGGG

S




GGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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