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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5zxdB_

Fold library idPDB HeaderMoleculeTitle
c5zxdB_2.29PDB header: translationChain: B: PDB Molecule: atp-binding cassette sub-family f member 1;


Added to library: Sat Jul 28 11:54:56 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASDIKLEKFSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVV
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Known secondary structure (DSSP)

STT
TT


TTSSTTSS


TTS

S


 .........80.........90.........100.........110.........120.........130.........140
Sequence ADETPAVQAVLRADTKRLKLLEEERRLQGQLEQGDDTAAERLEKVYEELRATGAAAAEAKARRILAGLGF
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Known secondary structure (DSSP)
SS
B
T
TTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DPEXQNRPTQKFSGGWRXRVSLARALFXEPTLLXLDEPTNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGF
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Known secondary structure (DSSP)
TSBGGGS


SSGGGG

T

S


 .........220.........230.........240.........250.........260.........270.........280
Sequence LDDVCTDIIHLDAQRLHYYRGNYXTFKKXYQQKQKELLKQPKEYTVRFTFPDPPPLSPPVLGLHGVTFGY
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Known secondary structure (DSSP)
STTS



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S



 .........290.........300.........310.........320.........330.........340.........350
Sequence QGQKPLFKNLDFGIDXDSRICIVGPNGVGKSTLLLLLTGKLTPTHGEXRKNHRLKIGFFNQQYAEQLRXE
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Known secondary structure (DSSP) TTS

S
TT

STTSSTSS

S
TT





S
 .........360.........370.........380.........390.........400.........410.........420
Sequence ETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLD
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Known secondary structure (DSSP) S



TT

TGGGGS
GGGS


SSTTTT

 .........430.........440.........450.........460.........470.........480.........490
Sequence IESIDALGEAINEYKGAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFEDYKREVLEALGEVXVSHHH
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Known secondary structure (DSSP)

S


TT
TT
SS
TT




S

 .
Sequence H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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