Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5zvs4_

Fold library idPDB HeaderMoleculeTitle
c5zvs4_3.80PDB header: viral proteinChain: 4: PDB Molecule: putative core protein ntpase/vp5;


Added to library: Sat Jul 7 08:27:01 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ITIVVIPTAHFSWTDTNFLNSVDYRLTSQPKIRDRFAVYAPGWLRRQLDEFSASLTASELLQALQTIPIP
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)



BTTB

SSS
TTTTSSSSTT


B

TTSTTTTTTS
S

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VKARCLLLPKPKREFCLTILPSLLGPRTFLLDVDADRDASYPLSVLWPQLRALALKSRLLLPPVALLRRV
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)



SSS







SS




TT

SS
B
SSSGGGGGSSS

GGGGTSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VDPGLKPTWSADSDAAFRALRLFDFSALPVVDIICLLESEPDDHGRIAPGTRLTIHSVPTDLLTSLSIQE
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)

SSSS
SS



SGGGS






S





STT




TTT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence GVRYPLRQFVHWVLLALLMSDDVTISGTRRSVKLETAHASARPFVHITVERCASARIIDVRGSPAMYANA
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) S






TSSSSS

B

B

SS
SSS


B

SSSS

BSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VCLTLPKGSYKSTIIDTLPAMFSDLPILEQAAVIDSDALGDFLERLENLDPNLLDRAVASILSPTSDTSD
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

TTS

TS
SS
S

TTS
B
TT
TT


GGGSSS

SSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence DAVTTVLDAFNALYREIMTPAQRARLPLLTQQGRVLAFAHSDYELLSANIPIQVVRGSIPIDHVVNLLAR
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) SS


BSS
S
TTTT



B
SB
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence RNRVGGTALQVLLDYCYRTQASPLAPTPAGRLYKQLFGPWLMVPRLSEPLIKLRLVASAPAKVLRAAGWT
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TT
SS
STTTTS
S



BTTTSSSGGGSGGG

S


TTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence IDGDPPLEVSCLCAYVTDRAAATALIERRLDSRALVTVGGDQLMFVEYAPPLPLVSIPRTFLLPVTYVVH
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) SSS

SSSTTT



SS


SS

SS

BSSSS
TT



SS


 .........570.........580...
Sequence WVPPQRVLLNGGNVSFTSGLEWT
Predicted secondary structure









SS confidence






















Known secondary structure (DSSP) SSTTTTT









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D