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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5zr1A_

Fold library idPDB HeaderMoleculeTitle
c5zr1A_3.00PDB header: dna binding protein/dnaChain: A: PDB Molecule: origin recognition complex subunit 1;


Added to library: Sat Jul 14 08:22:28 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PVIRKFTKKNVARAKKKYTPFSKRFKSIAAIPDLTSLPEFYGNSSELMASRFENKLKTTQKHQIVETIFS
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Known secondary structure (DSSP)



SS









B
S
GGGSSSSSTT


STTSTTTTTSSTTTTTTSTTSTT










 .........80.........90.........100.........110.........120.........130.........140
Sequence KVKKQLNSSYYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPD
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Known secondary structure (DSSP) SSTT


SS
STTTT

STTSSTTSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence FLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQD
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Known secondary structure (DSSP) GGG
SSTTS

B
TS
TTT


TTTTSSS

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence IMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSF
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Known secondary structure (DSSP) TGGG
SS


S
SST






TGGGTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FYVDTKTGNAILIDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAEKHYMAKHGYGYDGV
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Known secondary structure (DSSP) TTT




TTT

T




 .........360.........370.........380.........390.........400.........410.........420
Sequence QTVHITHVMKALNETLNSHVITFMTRLSFTAKLFIYALLNLMKKNGSQEQELGDIVDEIKLLIEVNGSNK
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Known secondary structure (DSSP)
S
STTS
T

SSTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence FVMEIAKTLFQQGSDNISEQLRIISWDFVLNQLLDAGILFKQTMKNDRICCVKLNISVEEAKRAMNEDET
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Known secondary structure (DSSP) SS
SSSSS


SS
TTTTS


SSTTT
SS
STTS
 ....
Sequence LRNL
Predicted secondary structure

SS confidence



Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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