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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5znmB_

Fold library idPDB HeaderMoleculeTitle
c5znmB_1.85PDB header: antibioticChain: B: PDB Molecule: colicin-d;


Added to library: Sat Sep 1 08:29:53 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MHEEAVARAEAEKAKAELFSKAGVNQPPVYTQEMMERANSVMNEQGALVLNNTASSVQLAMTGTGVWTAA
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Known secondary structure (DSSP)

T







TSTT



TTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GDIAGNISKFFSNALEKVTSPLLMRISLGANLEAMFSLSAQMLAGQGVVIEPGATSVNLPVRGQLINSNG
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Known secondary structure (DSSP) STT

TTT






GGGTS
TT



TT
S
STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QLALDLLKTGNESIPAAVPVLNAVRDTATGLDKITLPAVVGAPSRTILVNPVPQPSVPTDTGNHQPVPVT
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Known secondary structure (DSSP)
BTTTB

B



TTTS


BTTB


S

SS


SSTTS





 .........220.........230.........240.........250.........260.........270.........280
Sequence PVHTGTEVKSVEMPVVGGLRDFIYWRPDAAGTGVEAVYVMLNDPLDSGRFSRKQLDKKYKHAGDFGISDT
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Known secondary structure (DSSP)
B

SS







TT


TTSSSB
TT
SSS

TGGGGGGGT



 .........290.........300.........310.........320.........330.........340.........350
Sequence KKNRETLTKFRDAIEEHLSDKDTVEKGTYRREKGSKVYFNPNTMNVVIIKSNGEFLSGWKINPDADNGRI
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Known secondary structure (DSSP) S
S
TT


B
TTSTT

TTT

TTS


TTS
 .......
Sequence YLETGEL
Predicted secondary structure



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Known secondary structure (DSSP) SB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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