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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5zkqB_

Fold library idPDB HeaderMoleculeTitle
c5zkqB_2.90PDB header: signaling proteinChain: B: PDB Molecule: platelet-activating factor receptor,endolysin,endolysin,


Added to library: Sat Jun 23 09:25:21 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SHMDSEFRYTLFPIVYSIIFVLGVIANGYVLWVFARLYPFNEIKIFMVNLTMADMLFLITLPLWIVYYQN
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Known secondary structure (DSSP)

STT



T
 .........80.........90.........100.........110.........120.........130.........140
Sequence QGNWILPKFLCNVAGCLFFINTYCSVAFLGVITYNRYQAVTRPIQANTRKRGISLSLVIWVAIVGAASYF
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Known secondary structure (DSSP) TS


S
TS



TTGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence LILDSTNTVPDSAGSGDVTRCFEHYEKGSVPVLIIHIFIVFSFFLVFLIILFCNLVIIRTLLMQPVNIFE
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Known secondary structure (DSSP) GSS


SSSS
S



TT
S


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence MLRIDEGGGSGGDEEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLR
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Known secondary structure (DSSP) T

SS





T
TTTS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence MLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYAEVKRRDLWMACTVLAVFIICFVPHHVV
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Known secondary structure (DSSP) TT
TTSSSSSGGGSS

 .........360.........370.........380.........390.........
Sequence QLPWTLAELGFQDSKFHQAINDAHQVTLCLLSTNCVLNPVIYCFLTKKF
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Known secondary structure (DSSP) TTT
S
TTTGGGGGGGTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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