Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5zkpA_

Fold library idPDB HeaderMoleculeTitle
c5zkpA_2.81PDB header: signaling proteinChain: A: PDB Molecule: platelet-activating factor receptor,flavodoxin,platelet-


Added to library: Sat Jun 23 08:49:58 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SSHMDSEFRYTLFPIVYSIIFVLGVIANGYVLWVFARLYPCKKFNEIKIFMVNLTMADMLFLITLPLWIV
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP)





TT

SGGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YYQNQGNWILPKFLCNVAGCLFFINTYCSVAFLGVITYNRYQAVTRPISLVIWVAIVGAASYFLILDSTN
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP) TTS


S
S





T


 .........150.........160.........170.........180.........190.........200.........210
Sequence TVPDSAGSGDVTRCFEHYEKGSVPVLIIHIFIVFSFFLVFLIILFCNLVIIRTLLMQAKALIVYGSTTGN
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)
SSSSSS



TTTS
S


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIELQDDFIPLFDSLEETGAQ
Predicted secondary structure





































































SS confidence





































































Known secondary structure (DSSP) TT
TTS

STTTTTT
S

SSS

TTTT
TTT

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence GRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARDDIVGWAHDVRGAIAEVKRR
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP) T

TTSSSTTTTT

S

S
SGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence DLWMACTVLAVFIICFVPHHVVQLPWTLAELGFQDSKFHQAINDAHQVTLCLLSTNCVLNPVIYCFLTKK
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) TT
S
TT
 .........430......
Sequence FRKHLTEKFYSMRSSR
Predicted secondary structure



SS confidence















Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D