PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5zknA_

Fold library id	PDB Header	Molecule	Title
c5zknA_	2.21	PDB header: isomerase	Chain: A: PDB Molecule: putative n-acetylmannosamine-6-phosphate 2-epimerase;

Links to external resources
Added to library: Sat Sep 22 08:41:12 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F M N K I L E S I R G K L I V S C Q A L E D E P L H S S F I M G R M A Y A A Y S G G A A G I R A N T V E D I K E I K K N V S L P I I G I I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T S T T
T
S
S
B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K V Y N N S D V Y I T P T I K E V E D L I N E G V Q I I A I D A T K R E R P D R K D L K N F I A E I K E K Y P N Q L F M A D I S S V D E A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
B S
S
S
S S S
T T
S T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y A E K I G F D I V G T T L V G Y T D Y T K N Y K A L E E L K K V V K V V K I P V I A E G N I D T P L K A K K A L E I G A F A V V V G G A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T T T S S G G G T T
S
S S
S T
S

. . . . . . . . . 220 . . . . .

Sequence T R P Q Q I T K K F V D E M K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	M	N	K	I	L	E	S	I	R	G	K	L	I	V	S	C	Q	A	L	E	D	E	P	L	H	S	S	F	I	M	G	R	M	A	Y	A	A	Y	S	G	G	A	A	G	I	R	A	N	T	V	E	D	I	K	E	I	K	K	N	V	S	L	P	I	I	G	I	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T										T	T	S	T	T																	T								S													S							B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	V	Y	N	N	S	D	V	Y	I	T	P	T	I	K	E	V	E	D	L	I	N	E	G	V	Q	I	I	A	I	D	A	T	K	R	E	R	P	D	R	K	D	L	K	N	F	I	A	E	I	K	E	K	Y	P	N	Q	L	F	M	A	D	I	S	S	V	D	E	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S			B	S		S													S							S	S	S			T	T															S	T	T								S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	A	E	K	I	G	F	D	I	V	G	T	T	L	V	G	Y	T	D	Y	T	K	N	Y	K	A	L	E	E	L	K	K	V	V	K	V	V	K	I	P	V	I	A	E	G	N	I	D	T	P	L	K	A	K	K	A	L	E	I	G	A	F	A	V	V	V	G	G	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		S					T	T	T	T	S	S	G	G	G	T	T																S						S	S			S											T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	T	R	P	Q	Q	I	T	K	K	F	V	D	E	M	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)