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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5zibA_

Fold library idPDB HeaderMoleculeTitle
c5zibA_1.90PDB header: sugar binding proteinChain: A: PDB Molecule: alpha-1,6-mannosylglycoprotein 6-beta-n-


Added to library: Sat Aug 4 08:30:48 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALEKINVADIINGAQEKCVLPPMDGYPHCEGKIKWMKDMWRSDPCYADYGVDGSTCSFFIYLSEVENWCP
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Known secondary structure (DSSP)
TS
SS





TT
TTTTSSTT

S
TS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence HLPWRAKNPYHNSLAEIRTDFNILYSMMKKHEEFRWMRLRIRRMADAWIQAIKSLAEKQNLEKRKRKKVL
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Known secondary structure (DSSP)



S







B






TTSSTTS

TT
B

 .........150.........160.........170.........180.........190.........200.........210
Sequence VHLGLLTLGELVQWSDLITSLYLLGHDIRISASLAELKEIMKGCPIVELIYIDIVGLAQFKKTLGPSWVH
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Known secondary structure (DSSP)
GGG

TT

ST





SGGGGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence YQCMLRVLDSFGTEPEFNHANYAQSKGHKTPWGKWNLNPQQFYTMFPHTPDNSFLGFVVEQHLNSSDIHH
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Known secondary structure (DSSP) GGGG
TT


STT


SS





GGGSSS

TTS









 .........290.........300.........310.........320.........330.........340.........350
Sequence INEIKRQNQSLVYGKVDSFWKNKKIYLDIIHTYMEVHATVYTKNIPSYVKNHGILSGRDLQFLLRETKLF
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Known secondary structure (DSSP) TTS


S

SSGGGGTT
TTS



TTS
TT


S

T
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence VGLGFPYEGPAPLEAIANGCAFLNPKFNPPKSSKNTDFFIGKPTLRELTSQHPYAEVFIGRPHVWTVDLN
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Known secondary structure (DSSP)

S
S
S
STT

TTT
GGGTT
S



S
T
TTT
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NQEEVEDAVKAILNQKIEPYMPYEFTCEGMLQRINAFIEKQDFCHGQVMWPPLSALQVKLAEPGQSCKQV
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Known secondary structure (DSSP)
T







GGGS

SSSSS


S
GGG
TT
B
 .........500.........510.........520.........530.........540.........550.........560
Sequence CQESQLICEPSFFQHLNKDKDMLKYKVTCQSSELAKDILVPSFDPKNKHCVFQGDLLLFSCAGAHPRHQR
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Known secondary structure (DSSP) TTT

GGGGGGS
STTT


S

TT
STTTTSSGGG

SS
B
SSS
 .........570.........
Sequence VCPCRDFIKGQVALCKDCL
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Known secondary structure (DSSP)

BTTBTT

GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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