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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5zbiB_

Fold library idPDB HeaderMoleculeTitle
c5zbiB_2.09PDB header: plant proteinChain: B: PDB Molecule: peptide asparaginyl ligase;


Added to library: Sat May 12 08:27:18 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AGTKWAVLIAGSKGYQNYRHQADVCHAYQILRKGGVKDENIIVFMYDDIAYDIRNPYPGTIINSPDKKDV
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Known secondary structure (DSSP)





SGGGTT

GGG



STT
TT
SSTT

BSSTT

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence YKGVPKDYTGEDVNVQNFLAVILGNKTALTGGSGKVLDTRPNDHIFIYYTDHGYPGVLGMPTEPYLYAND
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Known secondary structure (DSSP)
TT


SB
GGG
ST
GGG
SSS







TT
S
TT

SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LIDTLKKKHALGTYEGLVFYVEACESASIFEGLLPDGLNIYVSTAAKAGEGSWVAYCPSQEPPVPAEYGT
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Known secondary structure (DSSP) T

SSTTGGGGTTTTS
TTSSSS
TT




TTSSS


GGG
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence CVGDLYSVTWMEDSDVYNLRTQTLHQQYELVKNKIAYASTVSQFGDFPISKDSLFEYMGTDPANEKRQYE
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Known secondary structure (DSSP)

S
TTSSBTTT



GGGGGSBT


GGGTT



 .........290.........300.........310.........320.........330.........340.........350
Sequence DEPHVGAVHQREADLHHFWDKYQKASEGSRNKVDARKQLVEVMLHRMHVDDSIESIAKLLFGSGAKASEM
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Known secondary structure (DSSP)




GGGS
TTS
TT

 .........360.........370.........380.........390.........400.........410.....
Sequence MNTIRPPGQPLVSDWDCLKTMVRTFETHCGSLSEYGMKYTRFLANICNSGIQKEKMGEASAQVCL
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Known secondary structure (DSSP) T



TT

S
S
S


GGGTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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