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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5z9tB_

Fold library idPDB HeaderMoleculeTitle
c5z9tB_1.80PDB header: lyaseChain: B: PDB Molecule: alginate lyase alye-ou02;


Added to library: Sat Mar 30 08:27:31 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSISEIDRSYLLSSDRLTEVDGNTLDVASEEQVAALKAQFENLKDGDEVVIPNGKYANLGQVTITANDVT
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Known secondary structure (DSSP)

GGG



TT
GGGS
B

T

TT

S



SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IRAEQAGAAWLTGLIQFELKGDDITLDGLVFTEGGPNERFGAVRMMGNGNTLQNSTFYYFNHDYTYEPDE
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Known secondary structure (DSSP) SSTT

SSS
SSSTT
S
STT
S




SS




T
 .........150.........160.........170.........180.........190.........200.........210
Sequence RRSEYPKYLWVSLWGKDGKVINNRFEGKQKRGTLIGVQKDDTPDNHLIANNIFMDQKPNQFNEFDIKEAI
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Known secondary structure (DSSP) TT






S
SSS
S



SSS
S


SS



S



S
SSSGGGSGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence RYNGNSWEAIRIGDSKSSQWDSSSKFVNNLMIDMDGERELISIKSGDNTISGNTIFQSAALISLRHGKGN
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Known secondary structure (DSSP) TS


S
TTTTTSB


S
S

SSSSBS
S
S
SS
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence TVENNMILGNEKRLTGGIRIYDEDHVIRNNYIANTRGRDGVIEGNADLRGGIVINTGIIDVANGEQLDQS
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Known secondary structure (DSSP) S

TT
BT



SBS
S
S
B
SB
SSTTS

B
SS

BSS
GGGT



TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VKGKELNKQWTPKNITIENNSLVDTEWGIVYGNQSHRVSLFNNAEVEGIYAGVDIAFKHNVVDNSQTPEF
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Known secondary structure (DSSP) STT

TTS



S
S
S




BS
SS


B
S

B

S

SSSTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence VSVRATHDFPLVGATYTDETYVGQVTDSELIESYSVELPKVTVENGLNAYQGEGADVSKLSVVTAETAGP
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Known secondary structure (DSSP)

TTS

BS
S
STGGGSS

B
S


TTTTBS

GGG




TTTSS
 .........
Sequence DYVLENTTK
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Known secondary structure (DSSP) SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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