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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5z96C_

Fold library idPDB HeaderMoleculeTitle
c5z96C_3.28PDB header: membrane proteinChain: C: PDB Molecule: short transient receptor potential channel 4;


Added to library: Sat Apr 21 09:10:25 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFKININCIDPLGRTALLIAIENENLE
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Known secondary structure (DSSP)

S




SS





TTTT
TTTS
SS

SS


SSS

SSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVP
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Known secondary structure (DSSP) TT


TTT

TT





SS
TT

TT
TT




 .........150.........160.........170.........180.........190.........200.........210
Sequence RPHEVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSEYEELSRQCKQFA
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Known secondary structure (DSSP)






TSTTTTTSS
S
TT
STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KDLLDQTRSSRELEIILNYRDDLARLKLAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTC
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Known secondary structure (DSSP) T

STTTT




TT
TTTS

SSTT
TTGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence FIIGLLFPVFSVCYLIAPKSPLGLFIRKPFIKFICHTASYLTFLFLLLLASQHIDNRQGPPPTIVEWMIL
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Known secondary structure (DSSP) TTTTS
SSSTTTTTTTSTTS



S

S
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence PWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSNPRESWDMWHPTLVAEA
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Known secondary structure (DSSP) SS
SSSS



SS


SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLSC
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Known secondary structure (DSSP) TGGGGGGGGSTTTTT



SSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence KGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAM
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Known secondary structure (DSSP)
SSSSSS


SSSSTTTTTS
GGGG

SS

TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence MNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVIIGRRAADNLRRHHQYQEVMRNLVKRYVAA
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Known secondary structure (DSSP) TTSTTSSTSSSSS

S
GGGTT

 .........640.........650.........660.....
Sequence MIREAKTEEGLTEENVKELKQDISSFRFEVLGLLR
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Known secondary structure (DSSP) TT

S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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