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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5z58x_

Fold library idPDB HeaderMoleculeTitle
c5z58x_4.90PDB header: splicingChain: X: PDB Molecule: smad nuclear-interacting protein 1;


Added to library: Sat Sep 22 09:07:47 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRR
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Known secondary structure (DSSP)
GGGSTTTTS
S

TTS
T

TTT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLH
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Known secondary structure (DSSP) TT

BTTTTT



SS
TT
GGG

 .........150.........160.........170.........180.........190.........200.........210
Sequence TDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVS
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Known secondary structure (DSSP)
TT
SSS

TTS









SS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VLQIHVTQGDILVFLTGQEEIEAACEMLQDRCRRLGIRELLVLPIYANLPSDMQARIFQPTPARKVVVAT
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TT

GGGGS




 .........290.........300.........310.........320.........330.........340.........350
Sequence NIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQ
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Known secondary structure (DSSP) TT


TT

TTTT

TTGGGSSS
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence HELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRK
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Known secondary structure (DSSP) TTS
S



GGGSS

T
S
SSS


SS


TTSB
TTS
B
 .........430.........440.........450.........460.........470.........480.........490
Sequence MAELPVDPMLSKMILASCSEEILTVAAMLSDNARVNFFLPGGDHLVLLNVYTQWAECYENFVQFRSMRRA
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Known secondary structure (DSSP) TTSSS






TTB


TTTT

 .........500.........510.........520.........530.........540.........550.........560
Sequence RDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARGYRTVVFIHPNSQQPRWLLYHELVLTTK
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Known secondary structure (DSSP) TT





SS
SSTTS



B


TT



SSSSS
 .........570.........580...
Sequence EFMRQVLEIESSWLLEVAPHYYK
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Known secondary structure (DSSP)

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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