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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5z58V_

Fold library idPDB HeaderMoleculeTitle
c5z58V_4.90PDB header: splicingChain: V: PDB Molecule: pre-mrna-splicing factor cwc22 homolog;


Added to library: Sat Sep 22 08:42:52 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KNSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAAL
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Known secondary structure (DSSP)


TTTS
TTTT
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence VAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDD
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Known secondary structure (DSSP)
TT
TTSB
TS

 .........150.........160.........170.........180.........190.........200.........210
Sequence SVEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPIILEGLD
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Known secondary structure (DSSP)
SS


TTSTTS
SS
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence LVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILEINLVSFRRTIYLAIQSSLDFE
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Known secondary structure (DSSP)
S
GGG


B


SSS




GGGGS



TT


STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ECAHKLLKMEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEGIFKEQYDTIHRLE
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Known secondary structure (DSSP) T

SGGGTSSS

SSTTTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TNKLRNVAKMFAHLLYTDSWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFF
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Known secondary structure (DSSP) TTTTT

GGGGG



SSS

TTTTT

TTT
 .........430.........440.........450.
Sequence EDNPRNTRFAINFFTSIGLGGLTDELREHLK
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Known secondary structure (DSSP)


SS

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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