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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5z1wB_

Fold library idPDB HeaderMoleculeTitle
c5z1wB_3.38PDB header: membrane proteinChain: B: PDB Molecule: polycystic kidney disease 2-like 1 protein;


Added to library: Sat Mar 31 08:28:47 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LRELVVYIVFLVDICLLTYGMTSSSAYYYTKVMSELFLHTPSDSGVSFQTISSMSDFWDFAQGPLLDSLY
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Known secondary structure (DSSP)
TT

TTTT


TTS

STT

STTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence WTKWYNNQSLGRGSHSFIYYENLLLGAPRLRQLRVRNDSCVVHEDFREDILNCYDVYSPDKEDQLPFGPQ
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Known secondary structure (DSSP)

B
TTS
B
SS
S

TTTB
SS
S


TTTTTT








TTSB

S

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NGTAWTYHSQNELGGSSHWGRLTSYSGGGYYLDLPGSRQASAEALQGLQEGLWLDRGTRVVFIDFSVYNA
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Known secondary structure (DSSP)
STTSS


TTTTT



SSS
S
S

SSTTSS
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NINLFCILRLVVEFPATGGTIPSWQIRTVKLIRYVNNWDFFIVGCEVVFCVFIFYYVVEEILVWNILDLV
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Known secondary structure (DSSP) TTT

TTSS






S

 .........290.........300.........310.........320.........330.........340.........350
Sequence VILLSIVAVGFHIFRTLEVNRLMGKLLQQPDTYADFEFLAFWQTQYNNMNAVNLFFAWIKIFKYIFAIMF
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Known secondary structure (DSSP)
SSS



GGGGG

 .........360.........370.........380.........390.........400.........410.........420
Sequence FIVFFAYAQLGYLLFGTQVENFSTFVKCIFTQFRIILGDFDYNAIDNANRILGPVYFVTYVFFVFFVLLN
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Known secondary structure (DSSP) SSSS
STTSSTT



TT
 .........
Sequence MFLAIINDT
Predicted secondary structure

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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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