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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5yylA_

Fold library idPDB HeaderMoleculeTitle
c5yylA_2.65PDB header: signaling proteinChain: A: PDB Molecule: major royal jelly protein 1;


Added to library: Sat Aug 11 08:35:21 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RGESLNKSLPILHEWKFFDYDFGSDERRQDAILSGEYDYKNNYPSDIDQWHDKIFVTMLRYNGVPSSLNV
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Known secondary structure (DSSP)
TT
TT



SS

B

SSTS

GGG
TT

TT
S
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ISKKVGDGGPLLQPYPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLDSGLVNNTQPMCSPKLLTFDLTTS
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Known secondary structure (DSSP)
SSSSS
GGGG

SS

S
S

TTS


BTTTB

S

TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QLLKQVEIPHDVAVNATTGKGRLSSLAVQSLDCNDTMVYIADEKGEGLIVYHNSDDSFHRLTSNTFDYDP
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Known secondary structure (DSSP)

S
TTT



SS


TTTTTTT





GGGS

G
 .........220.........230.........240.........250.........260.........270.........280
Sequence KFTKMTIDGESYTAQDGISGMALSPMTNNLYYSPVASTSLYYVNTEQFRTSDYQDIHYEGVQNILDTQSS
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Known secondary structure (DSSP) GG
TT




TTT
SS
S
SSS





SS
SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence AKVVSKSGVLFFGLVGDSALGCWNEHRTLERHNIRTVAQSDETLQMIASMKIKEALPHVPIFDRYINREY
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Known secondary structure (DSSP)
TTSTTTTTTS
SSGGG

TTT
S
SS

GGGGGG
 .........360.........370.........380.........390.........400.....
Sequence ILVLSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTRCENPDNDRTPFKISIHL
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Known secondary structure (DSSP)
TT


TTS

TTSTT






SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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