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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5yy0A_

Fold library idPDB HeaderMoleculeTitle
c5yy0A_3.24PDB header: metal binding proteinChain: A: PDB Molecule: cytosolic nife-hydrogenase, alpha subunit;


Added to library: Sat Jun 23 08:26:41 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YLPITVDHIAGGVEIVVGDDGVKEVKLNIIEGPRFFEAITLGKKLDEALAIYPRICSFCSAAHKLTAVEA
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TT







TSTTSBGGGTTGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AEKAIGFTPREEIQALREVLYIGDMIESHALHLYLLVLPDYLGYSGPLHMIDEYKKEMSIALDLKNLGSW
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Known secondary structure (DSSP)




T

SS


SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MMDELGHQENAVLGGFGKLPDKSVLENMKRRLKEALPKAEYTFELFTKLEQYETHIAVKPRNGVYGIYGD
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Known secondary structure (DSSP)


S


SSS
S



S
S








B




SS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence YLKASDGNEFPSEEYREHIKEFVVEHSFAKHSHYHGKPFMVGAISRLVNNADTLYGRAKELYESYKDLLR
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Known secondary structure (DSSP) SSSB
SSS
BSS





GGG
SSTT
B
SSSTT

SSTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence STNPFANNLAQALELVYFTERAIDLIDEALAKWPIRPRDEVALKDGFGVSTTEAPRGVLVYALKVENGRV
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Known secondary structure (DSSP) TT
STTTSSS








TTTTTT
 .........360.........370.........380.........390.........400
Sequence SYADIITPTAFNLAMMEQHVRMMAEKKLKLLAEMVVRAYDPCISCSVHVA
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Known secondary structure (DSSP)
T







TT

SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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